CRISPRCas9s clinical utility is constrained by strict PAM requirements and the inability to package large nucleases into AAV vectors. We engineered a modular Cas9, split into a nuclease scaffold and an exchangeable PAM-interacting domain (PID). This architecture enables one scaffold to function with multiple PIDs, allowing ultra-multiplexing and simple PID swapping to target all disease-relevant loci. Guided by cryo-EM, we identified functional split sites, validated activity with a GFP reporter assay, and restored fast cleavage kinetics using intein-mediated ligation. Exchanging PIDs broadened PAM compatibility significantly, with several split chimeras achieving robust editing across any site in human cells. This precision nuclease system offers a compact, PAM-flexible platform that fits within a single AAV and establishes a path toward versatile, clinical genome-editing therapies.